Table 5. Genes identified by GWAS with SNP markers that could be associated with height, diameter at root collar and insect damage recovery.

Trait LG p-value Gene model Functional annotation
Height 2 3.11E-05 Potri.002G032900 Inositol-pentakisphosphate 2-kinase family protein
5 7.76E-05 Potri.005G128100 Calmodulin-like 41
Potri.005G128200 Protein kinase family protein / peptidoglycan-binding LysM domain-containing protein
7 7.00E-05 Potri.007G009200 Leucine-rich receptor-like protein kinase family protein
Potri.007G009300 Hexokinase-like3
Diameter at root collar 3 5.85E-06 Potri.003G093700 no_info
Potri.003G093800 (1 of 1) PTHR31394:SF1 - TRANSMEMBRANE PROTEIN 199
5 1.41E-04 Potri.005G136200 NAD(P)-binding Rossmann-fold superfamily protein
Potri.005G136300 no_info
11 6.12E-05 Potri.011G104400 NAD(H) kinase 3
Recovery of defoliator damage 4 5.00E-07 Potri.004G199100 P-loop containing nucleoside triphosphate hydrolases superfamily protein
10 1.85E-05 Potri.010G252850 no_info